WEB-based GEne SeT AnaLysis Toolkit
 
Translating gene lists into biological insights...
 


User data and parameters: User data: textAreaUpload.txt, Organism: hsapiens, Id Type: ensembl_gene_stable_id, Ref Set: entrezgene, Significance Level: .05, Statistics Test: Hypergeometric, MTC: BH, Minimum: 2

The results for each enriched gene sets are listed in this table.
For each gene set, the first row lists database name, gene set name , and corresponding gene set ID. The second row lists the following statistics:
Finally, genes in the gene set are listed. For each gene, the table lists the user uploaded ID and value (optional), Entrez ID, Ensembl Gene Stable ID, Gene symbol, and description. Ensembl Gene Stable ID and Entrez Gene ID are linked to the Ensembl and Entrez Gene databases, respectively.

Database:Transcrription Target       Name:hsa_SCGGAAGY_V$ELK1_02       ID:DB_ID:2413
C=1176; O=8; E=1.47; R=5.43; rawP=0.0001; adjP=0.0041
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000103150 NA MLYCD malonyl-CoA decarboxylase 23417 ENSG00000103150
2  ENSG00000221909 NA FAM200A family with sequence similarity 200, member A 221786 ENSG00000221909
3  ENSG00000185515 NA BRCC3 BRCA1/BRCA2-containing complex, subunit 3 79184 ENSG00000185515
4  ENSG00000165506 NA DNAAF2 dynein, axonemal, assembly factor 2 55172 ENSG00000165506
5  ENSG00000157184 NA CPT2 carnitine palmitoyltransferase 2 1376 ENSG00000157184
6  ENSG00000166821 NA PEX11A peroxisomal biogenesis factor 11 alpha 8800 ENSG00000166821
7  ENSG00000120539 NA MASTL microtubule associated serine/threonine kinase-like 84930 ENSG00000120539
8  ENSG00000178537 NA SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 788 ENSG00000178537


Database:Transcrription Target       Name:hsa_V$PPAR_DR1_Q2       ID:DB_ID:2248
C=257; O=4; E=0.32; R=12.43; rawP=0.0003; adjP=0.0062
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000162461 NA SLC25A34 solute carrier family 25, member 34 284723 ENSG00000162461
2  ENSG00000072778 NA ACADVL acyl-CoA dehydrogenase, very long chain 37 ENSG00000072778
3  ENSG00000177666 NA PNPLA2 patatin-like phospholipase domain containing 2 57104 ENSG00000177666
4  ENSG00000134240 NA HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial) 3158 ENSG00000134240


Database:Transcrription Target       Name:hsa_GGATTA_V$PITX2_Q2       ID:DB_ID:2446
C=582; O=5; E=0.73; R=6.86; rawP=0.0008; adjP=0.0109
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000197442 NA MAP3K5 mitogen-activated protein kinase kinase kinase 5 4217 ENSG00000197442
2  ENSG00000072778 NA ACADVL acyl-CoA dehydrogenase, very long chain 37 ENSG00000072778
3  ENSG00000164283 NA ESM1 endothelial cell-specific molecule 1 11082 ENSG00000164283
4  ENSG00000165506 NA DNAAF2 dynein, axonemal, assembly factor 2 55172 ENSG00000165506
5  ENSG00000167315 NA ACAA2 acetyl-CoA acyltransferase 2 10449 ENSG00000167315


Database:Transcrription Target       Name:hsa_V$CRX_Q4       ID:DB_ID:2173
C=266; O=3; E=0.33; R=9.01; rawP=0.0046; adjP=0.0314
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000072778 NA ACADVL acyl-CoA dehydrogenase, very long chain 37 ENSG00000072778
2  ENSG00000164283 NA ESM1 endothelial cell-specific molecule 1 11082 ENSG00000164283
3  ENSG00000167315 NA ACAA2 acetyl-CoA acyltransferase 2 10449 ENSG00000167315


Database:Transcrription Target       Name:hsa_V$COUP_DR1_Q6       ID:DB_ID:2250
C=246; O=3; E=0.31; R=9.74; rawP=0.0037; adjP=0.0314
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000171503 NA ETFDH electron-transferring-flavoprotein dehydrogenase 2110 ENSG00000171503
2  ENSG00000177666 NA PNPLA2 patatin-like phospholipase domain containing 2 57104 ENSG00000177666
3  ENSG00000134240 NA HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial) 3158 ENSG00000134240


Database:Transcrription Target       Name:hsa_V$AP4_Q6_01       ID:DB_ID:2304
C=252; O=3; E=0.32; R=9.51; rawP=0.0039; adjP=0.0314
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000103150 NA MLYCD malonyl-CoA decarboxylase 23417 ENSG00000103150
2  ENSG00000146147 NA MLIP muscular LMNA-interacting protein 90523 ENSG00000146147
3  ENSG00000108784 NA NAGLU N-acetylglucosaminidase, alpha 4669 ENSG00000108784


Database:Transcrription Target       Name:hsa_GCANCTGNY_V$MYOD_Q6       ID:DB_ID:2435
C=913; O=5; E=1.14; R=4.37; rawP=0.0056; adjP=0.0328
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000103150 NA MLYCD malonyl-CoA decarboxylase 23417 ENSG00000103150
2  ENSG00000197442 NA MAP3K5 mitogen-activated protein kinase kinase kinase 5 4217 ENSG00000197442
3  ENSG00000146147 NA MLIP muscular LMNA-interacting protein 90523 ENSG00000146147
4  ENSG00000177666 NA PNPLA2 patatin-like phospholipase domain containing 2 57104 ENSG00000177666
5  ENSG00000108784 NA NAGLU N-acetylglucosaminidase, alpha 4669 ENSG00000108784




WebGestalt is currently developed and maintained by Jing Wang and Bing Zhang at the Zhang Lab. Other people who have made significant contribution to the project include Dexter Duncan, Stefan Kirov, Zhiao Shi, and Jay Snoddy.

Funding credits: NIH/NIAAA (U01 AA016662, U01 AA013512); NIH/NIDA (P01 DA015027); NIH/NIMH (P50 MH078028, P50 MH096972); NIH/NCI (U24 CA159988); NIH/NIGMS (R01 GM088822).